A question: how do I use this samtools phase data?
CC
CC Descriptions:
CC
CC CC comments
CC PS start of a phase set
CC FL filtered region
CC M[012] markers; 0 for singletons, 1 for phased and 2 for filtered
CC EV supporting reads; SAM format
CC // end of a phase set
CC
CC Formats of PS, FL and M[012] lines (1-based coordinates):
CC
CC PS chr phaseSetStart phaseSetEnd
CC FL chr filterStart filterEnd
CC M? chr PS pos allele0 allele1 hetIndex #supports0 #errors0 #supp1 #err1